Transcription Factor
| Accessions: | T090236_1.02 (CISBP 1.02) |
| Names: | ANL2, T090236_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 570 |
| Pfam Domains: | 135-190 Homeobox domain 324-543 START domain |
| Sequence: (in bold interface residues) | 1 MNFGSLFDNTPGGGSTGARLLSGLSYGNHTAATNVLPGGAMAQAAAAASLFSPPLTKSVY 60 61 ASSGLSLALEQPERGTNRGEASMRNNNNVGGGGDTFDGSVNRRSREEEHESRSGSDNVEG 120 121 ISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKF 180 181 WFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPAMLGDVSLEE 240 241 HHLRIENARLKDELDRVCNLTGKFLGHHHNHHYNSSLELAVGTNNNGGHFAFPPDFGGGG 300 301 GCLPPQQQQSTVINGIDQKSVLLELALTAMDELVKLAQSEEPLWVKSLDGERDELNQDEY 360 361 MRTFSSTKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGG 420 421 MAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAP 480 481 VIRRLPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQ 540 541 CECLAILISSSVTSHDNTCPFLTHLSLCLT |
| Interface Residues: | 134, 135, 136, 137, 138, 139, 140, 176, 177, 179, 180, 183, 184, 187, 188, 190, 191 |
| 3D-footprint Homologues: | 1puf_A, 3a01_E, 2lkx_A, 1zq3_P, 2h1k_B, 1puf_B, 2ld5_A, 1mnm_C, 3d1n_M, 5zjt_E, 3rkq_B, 1nk2_P, 1k61_B, 6es3_K, 3l1p_A, 7q3o_C, 2r5y_A, 5jlw_D, 7xrc_C, 1ig7_A, 1e3o_C, 2xsd_C, 1au7_A, 4j19_B, 1le8_A, 1b72_A, 5flv_I, 3lnq_A, 4qtr_D, 3cmy_A, 2hdd_A, 6wig_A, 1du0_A, 5hod_A, 8g87_X, 1jgg_B, 6a8r_A, 4xrm_B, 7psx_B, 4cyc_A, 4xrs_G, 1o4x_A, 1fjl_B, 5zfz_A, 2hos_A, 6m3d_C |
| Binding Motifs: | M0850_1.02 ataATWAATGm |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.