Transcription Factor

						

			
Accessions: T007492_1.02 (CISBP 1.02)

			
Names: ARID3A, T007492_1.02;
Organisms: Microcebus murinus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:ARID/BRIGHT
Length: 481
Pfam Domains:   119-207 ARID/BRIGHT DNA binding domain
Sequence: 
(in bold interface residues)		   1 KPKWEEEEELEEDLVDEEEEEEEEEEEEDYEEEEEDEEGLGPPGPAGLGSAALFPRKAQP   60
  61 PQAFRSDALPRALGGQERPGPGPAHPGGPAHTAPQLQPPDHGDWTYEEQFKQLYELDGDP  120
 121 KRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITK  180
 181 GLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQSFGGSLF  240
 241 AYSPGGAHGMLSSPKLPVSSLGLAASTNGSSIAPAPKIKKEEDSAIPITVPGRLPVSLAG  300
 301 HPVVAAQAAAVQAAAAQAAVAAQAAALEQLREKLESGEPPEKKMALVADEQQRLMQRALQ  360
 361 QNFLAMTAQLPMSIRINSQAPESRQDSAVSLTGTNGSNSISMSVEINGVMYTGMLFAQPP  420
 421 APTPPSASSKGSSGGGGGSGSSSQHPGSRGGNSGTSGSQAGPPAGPSAPATSSTSNNSTL  480
 481 P
Interface Residues: 176, 189, 190, 193, 194, 228
3D-footprint Homologues: 2oeh_A, 1kqq_A
Binding Motifs: M0103_1.02 wttTdATwa
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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