Transcription Factor

						

			
Accessions: T049109_1.02 (CISBP 1.02)

			
Names: T049109_1.02;, Zfp711
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:C2H2 ZF
Length: 805
Pfam Domains:    65-412 Zfx / Zfy transcription activation region
  427-449 Zinc finger, C2H2 type
  427-449 C2H2-type zinc finger
  458-480 C2H2-type zinc-finger domain
  520-543 C2H2-type zinc finger
  520-543 C2H2-type zinc-finger domain
  535-560 Zinc-finger double domain
  549-571 Zinc-finger double-stranded RNA-binding
  549-571 Zinc finger, C2H2 type
  549-571 C2H2-type zinc finger
  564-585 Zinc-finger double domain
  577-601 C2H2-type zinc-finger domain
  577-600 Zinc finger, C2H2 type
  577-600 C2H2-type zinc finger
  591-615 Zinc-finger double domain
  606-625 C2H2-type zinc finger
  634-657 C2H2-type zinc finger
  648-673 Zinc-finger double domain
  663-681 C2H2-type zinc finger
  663-685 Zinc finger, C2H2 type
  678-700 Zinc-finger double domain
  691-715 C2H2-type zinc-finger domain
  721-742 Zinc finger, C2H2 type
  721-742 C2H2-type zinc finger
  735-758 Zinc-finger double domain
  748-771 Zinc finger, C2H2 type
  748-771 C2H2-type zinc finger
  763-787 Zinc-finger double domain
  777-799 Zinc finger, C2H2 type
  777-800 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MESGGGSLGLHTSDARMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGI   60
  61 TLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITE  120
 121 TVRVPEQVFVADLVSGPDGHLEHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAGGGVP  180
 181 GSTVTIKTEEDDDDDVKSTSEDYLMISLDDVGEKLEHMGNTPLKIASDGSQEDVKEDAFG  240
 241 SEVIKVYIFKAEAEDDVEIGGTEIVTESEYSSGHSVAGVLDQSRMQREKMVYMAVKDSSQ  300
 301 EQDDISNADISNELCMEVIIGEEEGTPLEIPLQDCDVNKTGSPVLSPASYDERRVSRRYE  360
 361 ECQAPGNTFDSALENRNTTAAQYLQICDSMNTNKVLKQKIKKRRRGETRQWQTAVIIGPD  420
 421 GQPLTVYPCHICTKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESH  480
 481 KLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLL  540
 541 AVHSKSFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCAFRCADQSNLKTHIKSKH  600
 601 GSNLPYKCEHCPQAFGDERELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKD  660
 661 FPHKCEVCDKGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSL  720
 721 KCKRCKRGFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCE  780
 781 FCKKGFRRPSEKKQHIMRHHKETLM
Interface Residues: 531, 532, 533, 534, 537, 541, 559, 560, 561, 562, 563, 565, 566, 567, 568, 569, 572, 587, 588, 589, 590, 591, 592, 593, 594, 595, 598, 616, 617, 618, 619, 620, 623, 643, 645, 646, 647, 648, 650, 651, 673, 674, 676, 677, 680, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 713, 730, 731, 732, 733, 734, 737, 743, 757, 758, 759, 760, 761, 762, 763, 764, 765, 766, 767, 769, 770, 787, 788, 789, 790, 791, 792
3D-footprint Homologues: 5kkq_D, 2kmk_A, 7w1m_H, 5und_A, 7y3l_A, 7n5w_A, 3uk3_C, 8cuc_F, 4x9j_A, 1llm_D, 1ubd_C, 6u9q_A, 5ei9_F, 1mey_C, 7txc_E, 5kl3_A, 1f2i_J, 5k5i_A, 8ssq_A, 1g2f_F, 8ssu_A, 8h9h_G, 4m9v_C, 7eyi_G, 1tf6_A, 7y3m_I, 6e94_A, 6wmi_A, 2jpa_A, 2wbs_A, 5yj3_D, 2gli_A, 2i13_A, 5v3j_F, 6ml4_A, 8gn3_A, 5k5l_F, 7ysf_A, 2lt7_A, 6blw_A, 5yel_A, 6jnm_A, 6a57_A, 1tf3_A, 2drp_D
Binding Motifs: M0403_1.02 wkrGGCCymw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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