Transcription Factor

						

			
Accessions: T161865_1.02 (CISBP 1.02)

			
Names: EFNCRG00000000350, T161865_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 809
Pfam Domains:     51-84 Fungal Zn(2)-Cys(6) binuclear cluster domain
Sequence: 
(in bold interface residues)		   1 MQQQIGTSHHRAKGTREAMAIMGPRPDPSDTFSSTPRPAQSGRKGSKKVRTGCLTCKIRK   60
  61 VKCDEAKPFCVRCTKTGRRCDGYLDAKTLISRRPRRSGGMSQTVANNPRGSLSVFYQWAS  120
 121 EDERRSFHFFQDVTAPCLSGDFDGAFWRVLVLQICESEPAVKHAVLAVSSLHEAMVRGAV  180
 181 APYVDIADKQSFALFQYNKAISCLLDRMPDVDSRPLVPLLTCILFVFLEFMQVKDVESLI  240
 241 HLQQGHQLLSQLERKPSLRANPEFEIIRNHIVPMYTRISLTMLMIGGDPTAIPVPLKTLT  300
 301 DVPMTFETIDQVRYALHDFMEECLRFTKRSKPAKYQKVSPEELRALEGDQDLLMRKLSRF  360
 361 NVAFALFLSKNQKLLPSGCVDLIEIHTKTIHIWISTALSTKETAFDDHISFFSAIIPRAA  420
 421 AFMETLSNPTTRGSQTSKAATVTGTAASLRDARRFSAMFSFETHVIAPLFFVAIKCRHPE  480
 481 VRRAALDLLRRNPARRENVWRADIMASIAEYTIKLEERHLYSEYTPSHSASPPGATSTPF  540
 541 SYPLAPGEMWSGELQNTPFGYSDADGTATIVSSLGSGSGLVGEGTIDFAQSKLSMSQHDL  600
 601 PVDPSLLLAEDQHSVHSHSDCSYSAASSYDMDATAELSDTIYMGVDMNNTPVTVPMTLSA  660
 661 EVAAVTAARTTTATLTTSPAWTAPLVQNQHQQHLNWNSSLAATAHHSYSPPQPQSQSCSR  720
 721 KQSSGISFGPSHPPPAVPAQARRMRSPDAPYDVPEHFRVHTAALMSDCDDGKEEGTGSRR  780
 781 RSSNKVVLLRKLRGLEGEWDVQTEYLTVR
Interface Residues: 48, 59, 60, 61, 85, 87, 88, 95, 107, 108, 111
3D-footprint Homologues: 6o19_A, 1pyi_A, 2hap_D, 2er8_C, 7uik_T, 1zme_D, 3coq_A, 1d66_B, 6gys_C, 1hry_A, 2gzk_A
Binding Motifs: M1766_1.02 wwwdwsCGag
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.