Transcription Factor

						

			
Accessions: T107674_1.02 (CISBP 1.02)

			
Names: Irf9, T107674_1.02;
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:IRF
Length: 465
Pfam Domains:    77-182 Interferon regulatory factor transcription factor
  278-441 Interferon-regulatory factor 3
Sequence: 
(in bold interface residues)		   1 MHLPGGELKLRVGTVERGGEIRKSLEPAKPGTFSAAQALPISSAPPLPPAAAPPTPLAKR   60
  61 GMVRRRMASGKVRCTRKLRSWIVEQVESGHFPGVCWDDAAKTMFRIPWKHAGKQDFREDQ  120
 121 DAAIFKAWALFKEKHKDGDIGHPAVWKTRLRCALNKSSEFEEVPERGRMDVAEPYKVYRI  180
 181 LPAGTLPNQPRNQKSPCKRSISCVSPEREENMENGRTNGVVNHSDSGSNIGGGGNGSNRS  240
 241 DSNSNCNSELEEGAGTTEATIREDPVFLEHQLPLNSDYSLLLTFIYGGRVVGKTQVHSLD  300
 301 CRLVAERSDSESSMEQVEFPKPDPLEPTQHLLNQLDRGVLVASNSRGLFVQRLCPIPISW  360
 361 NAPEAPPGPGPHLLPSNKCVELFKTTYFCRDLAQYFQGQGPPPKFQATLHFWEESPGSSH  420
 421 SQENLITVQMEQAFARHLLEKIPEEEKAALFLLQHTEQSPSALGH
Interface Residues: 110, 112, 144, 148, 149, 151, 152, 155, 156
3D-footprint Homologues: 2pi0_B, 1if1_B, 2irf_L, 7oot_B, 2o61_A
Binding Motifs: M1262_1.02 awygaAAcy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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