Transcription Factor

						

			
Accessions: T136831_1.02 (CISBP 1.02)

			
Names: pfk, T136831_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:Pipsqueak
Length: 512
Pfam Domains:    13-107 BTB/POZ domain
  343-386 helix-turn-helix, Psq domain
  452-495 helix-turn-helix, Psq domain
Sequence: 
(in bold interface residues)		   1 MGHSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEA   60
  61 TIMLPDIRGDLLECMLSFIYMGETSLPSASLPEFLEAINLLGIKSAISFECNPSASPPSV  120
 121 DVENHSLAVESAKSITGLQIAEAELLDDEEEPHPMVSVPATTLAGSQHQPSHSSRSLEYI  180
 181 DVYEPPKITYSIEHMDGSSSGNQFILTENTGTFTITQSASSLSKIEADETGTSGAEVDLG  240
 241 DDDVDADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMDDDDDVHDQLVDEEIDDKPRK  300
 301 LGGGKTRIRRPISAKAVKRLSDCKPTRIQQFAALKREVKDDINDALDLAADAVIIEGLSL  360
 361 QKAADRFDISKTVLWRRVRTNPAYMRNNRERPSLQEAYERLKNGHSLKSISSELQIPMST  420
 421 LHRHKVRLSAQGRLPNFVSCRKRDNTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPK  480
 481 STLWRHLQRRTTSQNKKVKKELKANYGDDMLN
Interface Residues: 427
3D-footprint Homologues: 4wcg_A
Binding Motifs: M5148_1.02 GGAAcrrTKGGAwkk
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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