Transcription Factor

						

			
Accessions: T25428 (AthalianaCistrome v4_May2016)

			
Names: AT5G65410, ATHB25, T25428;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:ZF-HD
Length: 279
Pfam Domains:    72-125 ZF-HD protein dimerisation region
Sequence: 
(in bold interface residues)		   1 MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTSTGGGG   60
  61 GFMVVHGGGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNF  120
 121 HRKELPYFHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPME  180
 181 TSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLK  240
 241 VWLHNNKHTLGKSPSPLHHHQAPPPPPPQSSFHHEQDQP
Interface Residues: 195, 237, 240, 241, 244, 245, 247, 248
3D-footprint Homologues: 8ik5_C, 5hod_A, 5zfz_A, 6a8r_A, 3d1n_M
Binding Motifs: M0852 tmayTAATyAhgwww
M0853 ydTrATTAryr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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