Transcription Factor
| Accessions: | UP00318A (UniPROBE 20160601) |
| Names: | Gln3, Nitrogen regulatory protein GLN3, YER040W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P18494 |
| Description: | Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR), localization and activity regulated by quality of nitrogen source |
| Length: | 135 |
| Pfam Domains: | 51-85 GATA zinc finger |
| Sequence: (in bold interface residues) | 1 SSNTTNSVRKNSLIKPMSSTSLANFKRAASVSSSISNMEPSGQNKKPLIQCFNCKTFKTP 60 61 LWRRSPEGNTLCNACGLFQKLHGTMRPLSLKSDVIKKRISKKRAKQTDPNIAQNTPSAPA 120 121 TASTSVTTTNAKPIR |
| Interface Residues: | 60, 61, 63, 73, 77, 78, 81, 98 |
| 3D-footprint Homologues: | 3dfx_B, 3vd6_C, 1gat_A, 4gat_A |
| Binding Motifs: | UP00318A_1 rkwwhGsCcTTATCarsmmwa |
| Binding Sites: | AAGATAAG AGATAAGC AGCTTATC ATGATAAG CCGATAAG CCTTATCA CCTTATCG CGATAAGA CGCTTATC CTGATAAC CTTATCAA CTTATCGC GATAAGAA GCGATAAC GCTGATTA GCTTATCA TTATCAAA ACTTATCG CCGATAAC CTTATCGA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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