Transcription Factor

						

			
Accessions: T017935_1.02 (CISBP 1.02)

			
Names: NCU00144, T017935_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:bHLH
Length: 473
Pfam Domains:   329-417 Helix-loop-helix DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MMTEVPSAFSLGSGPKGLGIPEHATYSENQTTSIHTTHQRSGPSLPYPNFASSARQTTLA   60
  61 TSPSFPVTTASYHVPTPENPTQPPYYQQGAGWEQQQLPSTSAAALYNREHTAVPAPPALT  120
 121 PYEFAPSHDISGSCLGDGSTYGSPPVVQSPIQPGFGFLWANGHPPNSVGSNTPSQRAIAS  180
 181 PTARTFESISAPSDTGFSDHSDGVAYANIDERANHQQQQQQQQQSQQHRWVQTTTVSMEG  240
 241 CNKSEDGPWNTGEKKAFGQIMTPISCASPFNAAAAVPPAVPGGAAKAAKGTASATAALSK  300
 301 NKGKLRSASRAPKNIQPRPEETPEERKSRNSHNLVEKQYRNRLNAQFERLLAVLPDSVRS  360
 361 SMTMIGGCGGDPDGVNGNGGGGSVIPGQHPSLDFSIERRLSKAEVLDMSRRYILSLEKER  420
 421 DTLEREKEQLMHSIDQLRQGHGHPSHGGHAGAMYLVDRNGIPIGHGHMRGVGG
Interface Residues: 331, 332, 333, 335, 336, 339, 340
3D-footprint Homologues: 1an4_A, 5gnj_I, 7d8t_A, 1am9_A, 5i50_B, 7f2f_B, 5nj8_D, 8hov_A, 4h10_B, 6g1l_A, 8ia3_B
Binding Motifs: M0230_1.02 rtcAygyga
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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