Transcription Factor
| Accessions: | T134462_1.02 (CISBP 1.02) |
| Names: | Dpse\GA24899, T134462_1.02; |
| Organisms: | Drosophila pseudoobscura |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Nuclear receptor |
| Length: | 190 |
| Pfam Domains: | 12-81 Zinc finger, C4 type (two domains) |
| Sequence: (in bold interface residues) | 1 MSRIKGQNLGLICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCIVDK 60 61 AHRNQCQACRLKKCLQMGMNKDAVQNERQPRNTATIRPETLREMEHGRALREAAVAVGVF 120 121 GARQPAPRTFTAPQPPHLLHAAGGESHEQRQFSHVQCRRSAPLAEGEGCVWNGHGADQPR 180 181 QCLPFDQLEQ |
| Interface Residues: | 21, 22, 24, 25, 31, 32, 34, 35, 38, 39, 64, 86, 88, 90 |
| 3D-footprint Homologues: | 6fbq_A, 6l6q_B, 7wnh_D, 1lo1_A, 3g9m_B, 1a6y_A, 4oln_B, 2nll_B, 1lat_A, 7xv6_B, 2ff0_A, 1dsz_A, 4umm_E, 3cbb_A, 7xvn_C, 4iqr_B, 2han_A, 1hcq_E, 8cef_H, 5krb_G, 2han_B, 1kb2_B, 2a66_A, 8hbm_B, 4tnt_B, 5e69_A, 4hn5_B, 8rm6_A, 5emc_A, 7prw_B, 5cbx_B, 3g6t_A, 1r4i_A, 5cbz_E |
| Binding Motifs: | M1472_1.02 kTGATCTy |
| Related annotations: | PaperBLAST |
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