Transcription Factor
| Accessions: | Q9FGJ3 (JASPAR 2024) |
| Names: | AtNF-YB-2, AtNF-YB2, NFYB2_ARATH, Nuclear transcription factor Y subunit B-2, Transcriptional activator HAP3B |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9FGJ3 |
| Length: | 190 |
| Pfam Domains: | 31-95 Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31-95 Core histone H2A/H2B/H3/H4 |
| Sequence: (in bold interface residues) | 1 MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60 61 ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120 121 RTGLGRPQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQQNHMYGATGGGSDSG 180 181 GGAASGRTRT |
| Interface Residues: | 16, 35, 50, 53 |
| 3D-footprint Homologues: | 5yuy_A, 6r2v_B, 4g92_B, 4awl_B, 5t5k_E, 7cvo_B |
| Binding Motifs: | UN0689.1 wkACACGTrk UN0689.2 ACACGT |
| Binding Sites: | UN0689.1.18 UN0689.1.1 / UN0689.1.13 UN0689.1.10 / UN0689.1.11 UN0689.1.12 UN0689.1.14 UN0689.1.15 UN0689.1.16 / UN0689.1.6 UN0689.1.17 UN0689.1.19 / UN0689.1.8 UN0689.1.2 UN0689.1.20 / UN0689.1.7 UN0689.1.3 / UN0689.1.4 UN0689.1.5 UN0689.1.9 UN0689.2.1 / UN0689.2.10 / UN0689.2.11 / UN0689.2.13 / UN0689.2.15 / UN0689.2.16 / UN0689.2.17 / UN0689.2.18 / UN0689.2.19 / UN0689.2.2 / UN0689.2.20 / UN0689.2.3 / UN0689.2.4 / UN0689.2.5 / UN0689.2.6 / UN0689.2.7 / UN0689.2.8 UN0689.2.14 UN0689.2.9 UN0689.2.12 |
| Related annotations: | PaperBLAST |
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