Transcription Factor
| Accessions: | Q9FGJ3 (JASPAR 2024) |
| Names: | AtNF-YB-2, AtNF-YB2, NFYB2_ARATH, Nuclear transcription factor Y subunit B-2, Transcriptional activator HAP3B |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9FGJ3 |
| Length: | 190 |
| Pfam Domains: | 31-95 Core histone H2A/H2B/H3/H4 31-95 Histone-like transcription factor (CBF/NF-Y) and archaeal histone |
| Sequence: (in bold interface residues) | 1 MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60 61 ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120 121 RTGLGRPQTGGEVGEHQRDAVGDGGGFYGGGGGMQYHQHHQFLHQQNHMYGATGGGSDSG 180 181 GGAASGRTRT |
| Interface Residues: | 16, 35, 50, 53 |
| 3D-footprint Homologues: | 5yuy_A, 4awl_B, 6r2v_B, 4g92_B, 5t5k_E, 7cvo_B |
| Binding Motifs: | UN0689.1 wkACACGTrk UN0689.2 ACACGT |
| Binding Sites: | UN0689.1.18 UN0689.1.1 / UN0689.1.13 UN0689.1.10 / UN0689.1.11 UN0689.1.12 UN0689.1.14 UN0689.1.15 UN0689.1.16 / UN0689.1.6 UN0689.1.17 UN0689.1.19 / UN0689.1.8 UN0689.1.2 UN0689.1.20 / UN0689.1.7 UN0689.1.3 / UN0689.1.4 UN0689.1.5 UN0689.1.9 UN0689.2.1 / UN0689.2.10 / UN0689.2.11 / UN0689.2.13 / UN0689.2.15 / UN0689.2.16 / UN0689.2.17 / UN0689.2.18 / UN0689.2.19 / UN0689.2.2 / UN0689.2.20 / UN0689.2.3 / UN0689.2.4 / UN0689.2.5 / UN0689.2.6 / UN0689.2.7 / UN0689.2.8 UN0689.2.14 UN0689.2.9 UN0689.2.12 |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.