Transcription Factor
| Accessions: | VfHB21 (EEADannot 2025-01-07) |
| Names: | tung.gene.scaffold845.00062 |
| Organisms: | Vernicia fordii |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Homeo domain factors HD-ZIP |
| Length: | 213 |
| Pfam Domains: | 55-108 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MTTTMNHKVEDHMVLLSQLYPGVYTQIVPQQGEGKPRRRRKKNKGGEAGVSGVKKRKLSE 60 61 DQVNLLEMNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKT 120 121 AHESIVVEKCRLESEVLKLKEQLSETEKEIQRLTERVDGVSSNSPSSTLSIEAIDPPFLG 180 181 EFGMEGYGNIFYMPENNNINYIHGMDWFNQLYM |
| Interface Residues: | 55, 93, 94, 96, 97, 100, 101, 103, 104, 105, 107, 155, 156 |
| 3D-footprint Homologues: | 9b8u_A, 8ejp_B, 8pmf_A, 8ik5_C, 2ld5_A, 8osb_E, 7q3o_C, 7xrc_C, 8g87_X, 8bx1_A, 2lkx_A, 7psx_B, 2hdd_A, 4cyc_A, 8eml_B, 6es3_K, 1zq3_P, 2hos_A, 6m3d_C, 2h7g_X |
| Binding Motifs: | EEAD0060 yAATwATTr |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.