Transcription Factor

Accessions: ZmNAC128 (EEADannot 2023-12-22)
Names: GRMZM2G062650
Organisms: Zea mays
Libraries: EEADannot 2023-12-22 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:NAC
Length: 391
Pfam Domains: 24-155 No apical meristem (NAM) protein
Sequence:
(in bold interface residues)
1 MADQQQPQQQPQEMDVDRTGGLELPPGFRFHPSDFEIINDYLTKKVHDRDYSCIAIADAD 60
61 LNKTEPWDLPKVAKMGEKEWYFFYQKDRKYPTGLRANRATEAGYWKATGKDKEVYNPFAA 120
121 EGLLLVGMKKTLVFYKGRAPRGDKTNWVMHEYRLEGSGRLPASPASASGSATNIAAAMMK 180
181 ASASACKDEWVVCRVFNKTTGIKKTAAPAYQVAMAGPEMDQNQNNIPAIPIPMPLQLPLP 240
241 VPMQMQFPILPDFAMDPVAPYYPNPNAGAGMMPPMALAGMGGAGGLQINGALFGNPVPAP 300
301 LPMNFYHHQMGMGAAAGQVDMGAAAGQMDMGAAGAGAGGFDVAAPESRPSSMVSQKDEQA 360
361 NAAEISSMMSVTGPGSATTTIEMDGIWKYKY
Interface Residues: 90, 95, 97, 106, 108, 110, 135, 139, 140, 141, 144
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: EEAD0022 ACGCAA
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.