Transcription Factor
| Accessions: | UP00349A (UniPROBE 20160601) |
| Names: | Mig2, MLZ1, Regulatory protein MIG2, YGL209W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P53035 |
| Description: | Protein containing zinc fingers, involved in repression, along with Mig1p, of SUC2 (invertase) expression by high levels of glucose; binds to Mig1p-binding sites in SUC2 promoter |
| Length: | 118 |
| Pfam Domains: | 32-57 Zinc-finger double domain 44-68 C2H2-type zinc finger 45-68 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 PKKQTNFPVDNENRPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDE 60 61 LKRHMRTHTGQSQRRLKKASVQKQEFLTVSGIPTIASGVMIHQPIPQVLPANMAINVQ |
| Interface Residues: | 26, 27, 28, 29, 30, 32, 33, 34, 56, 57, 58, 59, 60, 61, 62, 63, 64, 67, 82, 85 |
| 3D-footprint Homologues: | 3uk3_C, 8cuc_F, 2kmk_A, 7y3l_A, 5yel_A, 4x9j_A, 2i13_A, 8h9h_G, 1llm_D, 7txc_E, 5kl3_A, 1ubd_C, 5ei9_F, 2jpa_A, 8ssq_A, 1mey_C, 7w1m_H, 6jnm_A, 5und_A, 2drp_D, 1f2i_J, 7eyi_G, 6a57_A, 5k5i_A, 8ssu_A, 6ml4_A, 5v3j_F, 1g2f_F, 7n5w_A, 6blw_A, 5kkq_D, 2lt7_A, 6u9q_A, 4m9v_C, 6e94_A, 7ysf_A, 6wmi_A, 1tf3_A, 1tf6_A, 7y3m_I, 8gn3_A, 2wbs_A, 5yj3_D, 2gli_A |
| Binding Motifs: | UP00349A_1 wyrwryTACCCCGCAwTtwrk |
| Binding Sites: | AACCCCGC ACCCCACA ACCCCGCA ACCCCGCC ACCCCGCG ATGCGGGG ATGTGGGG CACCCCGC CCCCACAA CCCCACAC CCCCCGCA CCCCGCAA CCCCGCAC CCCCGCAG GCCCCGCA GCGGGGAA GCGGGGTA GTGGGGTA TCCCCACA TCCCCGCA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.