Transcription Factor
| Accessions: | SlWIND1 (EEADannot 2025-01-07) |
| Names: | Solyc12g056980 |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:AP2/EREBP ERF/DREB |
| Length: | 307 |
| Pfam Domains: | 125-174 AP2 domain |
| Sequence: (in bold interface residues) | 1 MATSTMDFWTTTLLDLNSSNSGGELMEALAPFIKSASSPSPSPSVSPSFDLQSSSLSTSF 60 61 LYESFSSTSQPNMSSIGLNQAQIYLSQQVMPAVTFQNNNQYASYLGPKPVSMKQTGSPPK 120 121 PPKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNF 180 181 PHLRHNGSLIGSEFGEYKPLHSSVNAKLQAICQDLAQGKSIDTKKKRKVSSKAMMVEVEE 240 241 KEYKKSKTTAEAGSESDGSGSGSGSGSGSGSSPISEYTFDSIWDMCSENYVLHKDPSQEI 300 301 FNWASLL |
| Interface Residues: | 130, 131, 137, 139, 148, 150 |
| 3D-footprint Homologues: | 7wq5_A |
| Binding Motifs: | EEAD0154 AAATTT |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.