Transcription Factor

Accessions: CmERF024 (EEADannot 2025-01-07)
Names: ERF024
Organisms: Cucumis melo
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:AP2/EREBP ERF/DREB
Length: 190
Pfam Domains: 16-66 AP2 domain
Sequence:
(in bold interface residues)
1 MFFSKSKTFNSTSNPPRYRGVRRRSSGKWVSEIRVPRKPNRIWLGTFPTPEMAAVAYDVA 60
61 ALALKGPNADLNFPNSASSLPVPASTAACDIQAAATSAAAAIGAAADAMGLDGNHVSWSR 120
121 EKEEDGGGCEEELVEGGFVDEDMIFDMPNILMNMAEGMLLTPPPFNFNMNASNDFEYPPT 180
181 YSQDTLWEFP
Interface Residues: 23, 25, 30, 32, 34, 41, 43
3D-footprint Homologues: 7wq5_A
Binding Motifs: EEAD0158 crryGkCGGyrrmgr
EEAD0159 yckyYgCCGmCryyg
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.