Transcription Factor

Accessions: 4fth_B (3D-footprint 20231221)
Names: O66551_AQUAE, Transcriptional regulator (NtrC family)
Organisms: Aquifex aeolicus, strain VF5
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: O66551
Length: 61
Pfam Domains: 17-54 Bacterial regulatory protein, Fis family
Sequence:
(in bold interface residues)
1 RDLSYLLKIKELKEAKKEFEKIFIEEKLREYDYDLKRTAEEIGIDLSNLYRKIKSLNIRV 60
61 K
Interface Residues: 45, 46, 47, 48, 50, 51, 54
3D-footprint Homologues: 4fth_A
Binding Motifs: 4fth_AB TTGCAnnnnTGCAAA
Binding Sites: 4fth_C
4fth_D
Publications: Vidangos N.K, Heideker J, Lyubimov A, Lamers M, Huo Y, Pelton J.G, Ton J, Gralla J, Berger J, Wemmer D.E. DNA recognition by a σ(54) transcriptional activator from Aquifex aeolicus. Journal of molecular biology 426:3553-68 (2014). [Pubmed]
Related annotations: PaperBLAST

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