Transcription Factor

						

			
Accessions: T151138_1.02 (CISBP 1.02)

			
Names: GSVIVG00027588001, T151138_1.02;
Organisms: Vitis vinifera
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:TCP
Length: 340
Pfam Domains:   113-209 TCP family transcription factor
Sequence: 
(in bold interface residues)		   1 MKQITLRSGTHHVLSSIQKQEVEEEDDTRAVDLRINGGENAESIDHKKDDNRAPSSDPPS   60
  61 AAQPQEQPVAAVAAISLKAEPDAEERSPAAPPAMGVVPVAMPMPVQVRRPAPPVKRASTK  120
 121 DRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVP  180
 181 AIAMSVGGTLKIPTTSTATTQEPDPNKKKRKRPANSEFVDVNDAVSVSSGLAPIATPLAP  240
 241 QGLVPMWAIPSNAVGAFWMVPPTTAIAGPSNQPQIWTFPPTATPLINISARPISSFVSSM  300
 301 HPTINVASATASAASTMLRDFSLEIYDKQELQFMSRSSKH
Interface Residues: 121, 122, 123, 132, 134
3D-footprint Homologues: 7vp2_B, 7vp3_D
Binding Motifs: M1656_1.02 tgGGgCCCAC
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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