Transcription Factor
| Accessions: | 7ce1_D (3D-footprint 20231221) |
| Names: | A0A2I4PGE9_RHIRD, Fragment, LacI-type transcription factor |
| Organisms: | Agrobacterium tumefaciens A6 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | A0A2I4 |
| Length: | 327 |
| Pfam Domains: | 4-49 Bacterial regulatory proteins, lacI family 75-310 Periplasmic binding proteins and sugar binding domain of LacI family 171-317 Periplasmic binding protein-like domain |
| Sequence: (in bold interface residues) | 1 ERPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIAQQIGYQPNRAGVRLRTGKT 60 61 NVIALVLSVDEELMGFTSQMVFGITEVLATTQYHLVVTPHTHAKDSMVPIRYILETGSAD 120 121 GVIISKIEPNDPRVRFMTERKMPFVTHGRSDMGIEHAYHDFDNEAYAYEAVERLAQCGRK 180 181 RIAIIVPPSRFAFHDHARKGFTRGIRDFGVSEFPLDAITIETPLDKIRDFGKRLMQSDDR 240 241 PDGIVSISGSSTIALVAGFEAAGVRIGKDIDIVSKQSAEFLNWIQPQIHTVNEDIKLAGR 300 301 ELAKALLARINGAPPETLQSVSRPVWS |
| Interface Residues: | 5, 6, 15, 16, 17, 18, 20, 21, 27, 28, 29, 52, 55, 56, 57 |
| 3D-footprint Homologues: | 3oqm_C, 7ce1_D, 1efa_B, 1l1m_B, 1jft_A, 1zvv_A |
| Binding Motifs: | 7ce1_CD CTGCAACGTTGCAG 7ce1_D CGTTGCAG |
| Binding Sites: | 7ce1_c / 7ce1_d |
| Publications: | Ye F, Wang C, Fu Q, Yan XF, Bharath SR, Casanas A, Wang M, Song H, Zhang LH, Gao YG. Structural basis of a novel repressor, SghR, controlling Agrobacterium infection by cross-talking to plants. J Biol Chem 295:12290-12304 (2020). [Pubmed] |
| Related annotations: | PaperBLAST |
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