footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Transcription Factor

Accessions:	Q61286 (JASPAR 2024)
Names:	Class A helix-loop-helix transcription factor ME1, DNA-binding protein HTF4, E-box-binding protein, HTF4_MOUSE, TCF-12, Transcription factor 12, Transcription factor HTF-4
Organisms:	Mus musculus
Libraries:	JASPAR 2024 ¹ ¹ Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot:	Q61286
Length:
Binding Motifs:	MA0521.1 rRCAGCTGswg MA0521.2 gvaCAGCTGtbs MA0521.3 CAGCTG
Binding Sites:	MA0521.3.20 MA0521.3.1 / MA0521.3.10 / MA0521.3.13 / MA0521.3.14 / MA0521.3.15 / MA0521.3.16 / MA0521.3.17 / MA0521.3.18 / MA0521.3.2 / MA0521.3.3 / MA0521.3.4 / MA0521.3.5 / MA0521.3.6 / MA0521.3.7 / MA0521.3.8 / MA0521.3.9 MA0521.3.19 MA0521.1.16 MA0521.1.17 MA0521.1.2 MA0521.1.3 MA0521.1.4 MA0521.1.5 MA0521.1.15 MA0521.1.1 MA0521.1.10 MA0521.1.11 MA0521.1.12 MA0521.1.13 MA0521.1.14 MA0521.1.18 MA0521.1.19 MA0521.1.20 MA0521.1.6 MA0521.1.7 MA0521.1.8 MA0521.1.9 MA0521.2.1 MA0521.2.10 / MA0521.2.14 MA0521.2.11 MA0521.2.12 MA0521.2.13 / MA0521.2.15 MA0521.2.14 / MA0521.2.16 MA0521.2.15 / MA0521.2.17 MA0521.2.16 / MA0521.2.18 MA0521.2.17 / MA0521.2.19 MA0521.2.18 / MA0521.2.20 MA0521.2.19 MA0521.2.2 MA0521.2.20 MA0521.2.3 / MA0521.2.5 MA0521.2.4 / MA0521.2.6 MA0521.2.5 / MA0521.2.7 MA0521.2.6 / MA0521.2.8 MA0521.2.11 / MA0521.2.7 MA0521.2.12 / MA0521.2.8 MA0521.2.13 / MA0521.2.9 MA0521.2.10 MA0521.2.3 MA0521.2.4 MA0521.2.9 MA0521.3.11 MA0521.3.12
Publications:	Zhang Y, Doyle K, Bina M. Interactions of HTF4 with E-box motifs in the long terminal repeat of human immunodeficiency virus type 1. Journal of virology 66:5631-4 (1992). [Pubmed]
Related annotations:	PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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