Transcription Factor
| Accessions: | T161748_1.02 (CISBP 1.02) |
| Names: | NCU02752, T161748_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 1028 |
| Pfam Domains: | 47-84 Fungal Zn(2)-Cys(6) binuclear cluster domain 217-413 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MAPSSANPPDTMMVSETQNNKPTNAEETAGGATAGVNSSTPKQKRLACEICRRRKLKCDG 60 61 TKPSCSTCSRLGHVCAYDERRKKSGPKKGHLKALAERLKQVETLLKTQEAPRLSADGNPI 120 121 APNIVFGSGLSQPSQHAAAAAANFNVPGPSRGMATEGSMDQWQFQGDPSSTGLDDFNLGN 180 181 NLGLGMSSIGGDFTWEMIGLGLEEPLPPQETIDELHQVYFDKIHPSLPMIHRARYFHAMN 240 241 LAPNQRPPVCLRYAMWTLACSVSDRFLDLKELFYQRARRYLELDTIKGFGEHMITVSHCQ 300 301 TYVLLASYEFKWMYFPRAWMSIGSAVRLCQMMGLYRVDGGDLEVKQCLPPPRDWTEKEER 360 361 RRTFWMAFCQDRYASIGTGWPMIIDEKDILTDLPASDEAYDLSHPQETQSLNDVTLHTGP 420 421 SKLSSFGGVILLAYLFGRNLIHLHRPTEDDRDDDLNGEFWKRHRQMDNILLNVSLCIPSA 480 481 LKLPQGLANPNVVFTNMCIHTSTICLHQAAIFKADTNNLPASVSTECKMRCITSAHEIAS 540 541 IMRMASHLDLDRLNPNMSFCLYVAARVFVQFLKSRPDDGQVADSLRFLLSAMNALKRKNP 600 601 LTESFVVQLDVDLEALGAKVPKLKNAFSRSNDGHTSRAHMKPGTGLGASTQHGNMYHQEC 660 661 QFLRTVEDDGNPVNAPNLVKPVDFDDPLVQLPGSSRNTAPDWSSSVEQRSPILSAGGQHG 720 721 GDSARTDGLAFDTFIHGRMSNNISLPPNYQTRPHHDPDAGGNSDGVPLSTPSPNSNQPTP 780 781 NSGTSSSNHHHHLCHQMHQHQHQHPHHHPHPQPHPHAHHQQEHGQGQVQGLAPTNDGRHM 840 841 SGSGGSSSSMSFDNRNKNHSTSPITPGSSTNPTITTAATALATTATATTTTSTALDINPS 900 901 PAAAVGFFLDPTAFGMPGVEIAPENTTNSGLARTASDPHATTIVGNPNNGNNLGMGSGVG 960 961 MGMNIGVGRDGGGGGMTPDSVLRSLMAMGNMEGMDGMEGCGMDLGWGNGGTSHELDSHGN 1020 1021 RHGDGGSF |
| Interface Residues: | 42, 54, 55, 56, 82, 83, 84, 85, 88, 91 |
| 3D-footprint Homologues: | 6o19_A, 2er8_C, 1hwt_C, 1pyi_A, 1d66_B, 7uik_T, 3coq_A, 6gys_C, 1zme_D |
| Binding Motifs: | M1730_1.02 wwwyyccgat |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.