Transcription Factor
| Accessions: | SlBEL2 (EEADannot 2025-01-07) |
| Names: | Solyc06g074120 |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Homeo domain factors TALE-type HD |
| Length: | 699 |
| Pfam Domains: | 213-356 Associated with HOX 422-461 Homeobox KN domain 424-461 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MYYQGTSDNNIQADHHQQQHNNLGNSNNNIQTLYLMNPNSYMQGYTTTDTQQHLQQQQNQ 60 61 HQLLFLNSAPAGGNALSHANIQHAPLQQQHFVGVPLPAVSLHDQINHHGLLQRMWNNQDQ 120 121 SQQVIVPSSTVVSATSCGGTTTDLASQLAFQRPIVVSPTPQHRQQQQQQGGLSLSLSPQQ 180 181 QQQISFNNNISSSSPRTNNVTIRGTMDGCSSNMILGSKYLKAAQELLDEVVNIVGKSNKG 240 241 DDQKKDNSMNKELIPLVSDVNTNSSGGGGGESSSRQKNEVAIELTTAQRQELQMKKAKLL 300 301 AMLEEVEQRYRQYHHQMQIIVSSFEQVAGVGSAKSYTQLALHAISKQFRCLKDAISEQVK 360 361 ATSKSLGEDEGLGGKIEGSRLKFVDHHLRQQRALQQLGMMQPNAWRPQRGLPERAVSVLR 420 421 AWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEVKNQEQ 480 481 NSSNTSGDNKNKETNISAPNEEKQPIITSSLLQDGTTQAEISTSTISTSPTAGASLHHAH 540 541 NFSFLGSFNMENTTTTVDHIENNAKKPRNHDMHKFSPSSILSSVEMEAKARESTNKGFTN 600 601 PLMAAYAMGDFGRFDPHDQQMTANFHGNNGVSLTLGLPPSENLAMPVSQQNYLSNELGSR 660 661 PEIGSHYNRMGYENIDFQSGNKRFPTQLLPDFVTGNLGT |
| Interface Residues: | 453, 456, 457, 460, 461 |
| 3D-footprint Homologues: | 2d5v_B |
| Binding Motifs: | EEAD0086 TTGAC |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.