Transcription Factor
| Accessions: | T110281_1.02 (CISBP 1.02) |
| Names: | T110281_1.02;, XM_002876896.1 |
| Organisms: | Arabidopsis lyrata |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:MADF |
| Length: | 378 |
| Pfam Domains: | 55-122 Myb/SANT-like DNA-binding domain 58-145 Myb/SANT-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MFVSDNNPSRDMNMMIDVTSSNGDLPIQQQQHHQIILGDSSGGEDHEIIKAPKKRAETWA 60 61 QDETRCLISLRREMDNLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNILKEFKK 120 121 AKYQDDDKATSGGSTKMSYYKEIEDIFTERNKKVALYKSPSTTTPPSSAKVDSFMQFTDK 180 181 GFEDTGIPFTSVEANGRPTLNLETQLDHDGLPLPIAADPVTANGVPPWSWRDTAGNGGDG 240 241 QPFVGRIITVKFGDYTRRFGIDGTAEAIKEAIRSAFRLRTRRAFWLEDEEQVIRSLDRDM 300 301 PLGNYTLRVDEGIAVRVCHYDESDPLPVHQEEKIFYTEEDYRDFLARRGWTCLREIDAFR 360 361 NIDNMDDLQSGVLYRGMR |
| Interface Residues: | 105, 108, 109, 110, 112, 113, 197, 199, 223, 226 |
| 3D-footprint Homologues: | 5eyb_B, 3hqg_A, 2m2w_A, 7k30_A |
| Binding Motifs: | M1282_1.02 ggytAACCCCytt |
| Related annotations: | PaperBLAST |
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