Transcription Factor
| Accessions: | O96083 (JASPAR 2024) |
| Names: | O96083_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | O96083 |
| Length: | 709 |
| Pfam Domains: | 35-84 BED zinc finger |
| Sequence: (in bold interface residues) | 1 MSEGVPASPVAIGEIKYEDVSQLNFSKLYSPKMKSVYWRYFGFPSNDNNEVITKQNVVCI 60 61 KCHKVLTNHGNTTNLRAHLQHRHKDLFKELCQEHDIHVPPRKTPRNVSHPPLSKRNVSSR 120 121 RVKLEFINNRNHDNASDDELDEAAVATAAMQAEEDASSQTMLYETMVPFTYDEAENLVVE 180 181 EERLLMEPKYGRKRKVATPSSALMHGRVIKHEEGGYAAVANIANLAEALTDIVIKDLRNV 240 241 DSLYDAGFGEFLRQVLGNSAAMPEPHKIDSLINEMHASKFLEIGEITRDFTSEKPFSLAF 300 301 EMWVNVEQRRFLSIFHHFLDEETHSVRGMLYATVEYNDYIVFDDLLTDFYLANCTLAIIN 360 361 YDEEEDLLHTYLREKNIPISLCYVSVIDKCLRRVFEIEEVATLLDQVKDLMQRHSTEIAS 420 421 KVSEVPMPTYNEHFPWTLYETLKFFAESISWSEDMDHLVISAKTVTEALSALVIALDTLR 480 481 GEDIPLCSMLSPITSKILIKKLGIAEQDDPLMMNLKRTISSVLQAHVISNDNLTAAALLD 540 541 PRFHRLTTIDNLERTVRMLTHKYNINFGGVGEGESNEVAATSSVVAIKSEPRVLDGSAPK 600 601 KLGLKLLFDSNEIPNPPKRDADSSVESDLKRYRNEVVVQLDESPIEWWLKMGHIYGTLRD 660 661 LASLYHSVPGVVTLSFKKALRDQIYDFNKRFMLTGSHIDASLFLHHHNN |
| Interface Residues: | 266, 395 |
| 3D-footprint Homologues: | 6dta_B, 6sxb_G |
| Binding Motifs: | MA1456.1 rhTATCGATa MA1456.2 TATCGATa |
| Binding Sites: | MA1456.1.1 MA1456.1.10 MA1456.1.11 / MA1456.1.6 / MA1456.1.7 MA1456.1.12 MA1456.1.13 MA1456.1.14 MA1456.1.15 MA1456.1.16 MA1456.1.17 MA1456.1.18 MA1456.1.19 MA1456.1.2 MA1456.1.20 / MA1456.1.5 MA1456.1.3 MA1456.1.4 MA1456.1.8 MA1456.1.9 MA1456.2.10 / MA1456.2.14 / MA1456.2.16 MA1456.2.11 / MA1456.2.12 / MA1456.2.20 / MA1456.2.4 / MA1456.2.5 / MA1456.2.6 / MA1456.2.7 MA1456.2.15 / MA1456.2.17 / MA1456.2.19 / MA1456.2.9 MA1456.2.3 MA1456.2.1 / MA1456.2.13 / MA1456.2.18 MA1456.2.2 MA1456.2.8 |
| Publications: | Zhu LJ, Christensen RG, Kazemian M, Hull CJ, Enuameh MS, Basciotta MD, Brasefield JA, Zhu C, Asriyan Y, Lapointe DS, Sinha S, Wolfe SA, Brodsky MH. FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system. Nucleic Acids Res : (2011). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.