Transcription Factor
| Accessions: | T16682 (AthalianaCistrome v4_May2016) |
| Names: | AT3G55370, OBP3, T16682; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:C2C2-DOF |
| Length: | 368 |
| Pfam Domains: | 118-177 Dof domain, zinc finger |
| Sequence: (in bold interface residues) | 1 MVFSSLPVNQFDSQNWQQMISILVFFSTSRLFKKLFLVDKNLFSCLLQGLMYNVFLTGLI 60 61 FSLQGNQHQLECVTTDQNPNNYLRQLSSPPTSQVAGSSQARVNSMVERARIAKVPLPEAA 120 121 LNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKRSKSRS 180 181 KSTVVVSTDNTTSTSSLTSRPSYSNPSKFHSYGQIPEFNSNLPILPPLQSLGDYNSSNTG 240 241 LDFGGTQISNMISGMSSSGGILDAWRIPPSQQAQQFPFLINTTGLVQSSNALYPLLEGGV 300 301 SATQTRNVKAEENDQDRGRDGDGVNNLSRNFLGNININSGRNEEYTSWGGNSSWTGFTSN 360 361 NSTGHLSF |
| Interface Residues: | 149, 153, 170 |
| 3D-footprint Homologues: | 6ama_L, 6amk_B |
| Binding Motifs: | M0256 tTtwCTTTTtyyytTTttttt M0274 tttwttytttwaCTTTTtk |
| Related annotations: | PaperBLAST |
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