Transcription Factor

						

			
Accessions: AtMYB39 (AthaMYB 1.0)

			
Names: AtMYB39, Myb-related protein 39, Transcription factor MYB39
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q8GWP0
Length: 361
Pfam Domains:     15-62 Myb-like DNA-binding domain
    18-77 Myb-like DNA-binding domain
   68-113 Myb-like DNA-binding domain
   71-116 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMN   60
  61 YLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQM  120
 121 GIDPVTHEPRTNDLSPILDVSQMLAAAINNGQFGNNNLLNNNTALEDILKLQLIHKMLQI  180
 181 ITPKAIPNISSFKTNLLNPKPEPVVNSFNTNSVNPKPDPPAGLFINQSGITPEAASDFIP  240
 241 SYENVWDGFEDNQLPGLVTVSQESLNTAKPGTSTTTKVNDHIRTGMMPCYYGDQLLETPS  300
 301 TGSVSVSPETTSLNHPSTAQHSSGSDFLEDWEKFLDDETSDSCWKSFLDLTSPTSSPVPW  360
 361 *
Interface Residues: 15, 50, 51, 52, 53, 55, 56, 60, 61, 102, 103, 106, 107, 110, 111, 112
3D-footprint Homologues: 3osg_A, 1w0t_A, 2kdz_A, 7xur_A, 6kks_A, 1mse_C, 3zqc_A
Binding Motifs: AtMYB39_I wwmaGTTr
AtMYB39_II GsTwGkTr
Binding Sites: AAAAGTTA
ACAAGTTA
ATTAGTTG
GCTTGTTG
GGTAGGTG
GTCAGTTA
TACTGTTG
TAGTTA
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.