Transcription Factor

						

			
Accessions: T057697_1.02 (CISBP 1.02)

			
Names: lola, T057697_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 602
Pfam Domains:    23-117 BTB/POZ domain
Sequence: 
(in bold interface residues)		   1 MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATL   60
  61 LQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRT  120
 121 GGGVAPKPESSGHHRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRR  180
 181 KVRRRSMENDAHDNSNSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQAS  240
 241 STQQQQPLTSTNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQTTSDAINTEN  300
 301 VQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGVVVKQLASVVDKS  360
 361 SSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELDQTAGTSQ  420
 421 GGEGSSQTYATWQHDRSQDELGLMAQDAQQRDPQVITVDRKYNLRTQESSGSSADLPSTS  480
 481 KQKVAAVQHKLAELASLDQKSENEEPTDLDNAASLKKAMATSDAMIALQQLASISTARSL  540
 541 QHLVQNMSNIDNSALVPGRKLPRNAAKRSPKYESNRCPLCSRVCRSQAFLNEHMRKEHSV  600
 601 LI
Interface Residues: 586, 588, 589, 590, 593
3D-footprint Homologues: 4m9v_C, 5k5l_F
Binding Motifs: M5081_1.02 rGGTTyc
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.