Transcription Factor

						

			
Accessions: T13654 (AthalianaCistrome v4_May2016)

			
Names: AT3G23220, ESE1, T13654;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:AP2-EREBP
Length: 139
Pfam Domains:     13-63 AP2 domain
Sequence: 
(in bold interface residues)		   1 MERIESYNTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFG   60
  61 MRGQRAILNFPHEYQMMKDGPNGSHENAVASSSSGYRGGGGGDDGREVIEFEYLDDSLLE  120
 121 ELLDYGERSNQDNCNDANR
Interface Residues: 18, 20, 21, 22, 25, 26, 28, 30, 33, 38, 40, 41
3D-footprint Homologues: 1gcc_A, 7wq5_A, 5wx9_A, 7et4_D, 6d92_F
Binding Motifs: M0097 ygryGGCGGCGGmGg
M0133 rryGGCGGCGGcggyggcgr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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