Transcription Factor
| Accessions: | Q39163 (JASPAR 2024) |
| Names: | AtbZIP26, bZIP transcription factor 26, OBF5, Ocs element-binding factor 5, TGA5_ARATH, Transcription factor TGA5 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q39163 |
| Length: | |
| Binding Motifs: | MA1047.1 rTGACGTm MA1047.2 wwgaTGACGTCAycw MA1047.3 aTGACGTCA |
| Binding Sites: | MA1047.3.15 / MA1047.3.2 MA1047.1.1 MA1047.1.10 MA1047.1.11 MA1047.1.12 MA1047.1.13 MA1047.1.14 MA1047.1.15 MA1047.1.16 MA1047.1.17 MA1047.1.18 MA1047.1.19 MA1047.1.2 MA1047.1.20 MA1047.1.3 MA1047.1.4 MA1047.1.5 / MA1047.1.6 MA1047.1.7 MA1047.1.8 MA1047.1.9 MA1047.2.1 MA1047.2.10 MA1047.2.11 / MA1047.2.7 MA1047.2.12 MA1047.2.13 / MA1047.2.8 MA1047.2.14 MA1047.2.15 MA1047.2.16 MA1047.2.17 MA1047.2.18 / MA1047.2.9 MA1047.2.19 MA1047.2.1 / MA1047.2.2 MA1047.2.10 / MA1047.2.20 MA1047.2.3 MA1047.2.2 / MA1047.2.4 MA1047.2.3 / MA1047.2.5 MA1047.2.4 / MA1047.2.6 MA1047.2.5 / MA1047.2.7 MA1047.2.6 / MA1047.2.8 MA1047.2.9 MA1047.2.11 MA1047.2.12 MA1047.2.13 MA1047.2.14 MA1047.2.15 MA1047.2.16 MA1047.2.17 MA1047.2.18 MA1047.2.19 MA1047.2.20 MA1047.3.1 / MA1047.3.10 MA1047.3.11 / MA1047.3.13 MA1047.3.12 / MA1047.3.14 MA1047.3.16 MA1047.3.17 / MA1047.3.18 / MA1047.3.19 / MA1047.3.20 / MA1047.3.3 MA1047.3.4 / MA1047.3.5 MA1047.3.6 MA1047.3.7 MA1047.3.8 MA1047.3.9 |
| Publications: | Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Related annotations: | PaperBLAST |
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