Transcription Factor

Accessions: Q39163 (JASPAR 2024)
Names: AtbZIP26, bZIP transcription factor 26, OBF5, Ocs element-binding factor 5, TGA5_ARATH, Transcription factor TGA5
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q39163
Length:
Binding Motifs: MA1047.1 rTGACGTm
MA1047.2 wwgaTGACGTCAycw
MA1047.3 aTGACGTCA
Binding Sites: MA1047.3.15 / MA1047.3.2
MA1047.1.1
MA1047.1.10
MA1047.1.11
MA1047.1.12
MA1047.1.13
MA1047.1.14
MA1047.1.15
MA1047.1.16
MA1047.1.17
MA1047.1.18
MA1047.1.19
MA1047.1.2
MA1047.1.20
MA1047.1.3
MA1047.1.4
MA1047.1.5 / MA1047.1.6
MA1047.1.7
MA1047.1.8
MA1047.1.9
MA1047.2.1
MA1047.2.10
MA1047.2.11 / MA1047.2.7
MA1047.2.12
MA1047.2.13 / MA1047.2.8
MA1047.2.14
MA1047.2.15
MA1047.2.16
MA1047.2.17
MA1047.2.18 / MA1047.2.9
MA1047.2.19
MA1047.2.1 / MA1047.2.2
MA1047.2.10 / MA1047.2.20
MA1047.2.3
MA1047.2.2 / MA1047.2.4
MA1047.2.3 / MA1047.2.5
MA1047.2.4 / MA1047.2.6
MA1047.2.5 / MA1047.2.7
MA1047.2.6 / MA1047.2.8
MA1047.2.9
MA1047.2.11
MA1047.2.12
MA1047.2.13
MA1047.2.14
MA1047.2.15
MA1047.2.16
MA1047.2.17
MA1047.2.18
MA1047.2.19
MA1047.2.20
MA1047.3.1 / MA1047.3.10
MA1047.3.11 / MA1047.3.13
MA1047.3.12 / MA1047.3.14
MA1047.3.16
MA1047.3.17 / MA1047.3.18 / MA1047.3.19 / MA1047.3.20 / MA1047.3.3
MA1047.3.4 / MA1047.3.5
MA1047.3.6
MA1047.3.7
MA1047.3.8
MA1047.3.9
Publications: Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed]

Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.