Transcription Factor

Accessions: 4a04_A (3D-footprint 20231221)
Names: T-box protein 1, T-BOX TRANSCRIPTION FACTOR TBX1, TBX1_HUMAN, Testis-specific T-box protein
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: O43435
Length: 181
Pfam Domains: 4-181 T-box
Sequence:
(in bold interface residues)
1 GVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDK 60
61 RYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGH 120
121 IILNSMHRYQPRFHVVYVDPRENFKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFR 180
181 D
Interface Residues: 29, 158, 159, 175, 178, 179
3D-footprint Homologues: 5flv_I, 1xbr_B, 6f59_B, 2x6v_A, 4a04_B, 1h6f_B
Binding Motifs: 4a04_AB TnnnCACcnaGgTGnnnA
Publications: El Omari K, De Mesmaeker J, Karia D, Ginn H, Bhattacharya S, Mancini E.J. Structure of the DNA-bound T-box domain of human TBX1, a transcription factor associated with the DiGeorge syndrome. Proteins : (2011). [Pubmed]
Related annotations: PaperBLAST

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