Transcription Factor

Accessions: 6lc1_A (3D-footprint 20231221), 6lc1_G (3D-footprint 20231221)
Names: Early response protein NAK1, NR4A1_HUMAN, Nuclear hormone receptor NUR/77, Nuclear receptor subfamily 4 group A member 1, Nur77, Orphan nuclear receptor HMR, Orphan nuclear receptor TR3, ST-59, Testicular receptor 3
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P22736
Length: 86
Pfam Domains: 2-69 Zinc finger, C4 type (two domains)
Sequence:
(in bold interface residues)
1 RCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKRRRNRCQFCRFQ 60
61 KCLAVGMVKEVVRTDSLKGRRGRLPS
Interface Residues: 10, 11, 13, 14, 20, 21, 23, 24, 27, 28, 32, 33, 36, 52, 78, 81, 83
3D-footprint Homologues: 6fbq_A, 7wnh_D, 6l6q_B, 1lo1_A, 3g9m_B, 1a6y_A, 4oln_B, 2nll_B, 1lat_A, 2ff0_A, 1dsz_A, 3cbb_A, 7xv6_B, 4iqr_B, 2han_A, 1hcq_E, 4umm_E, 8cef_H, 2han_B, 1kb2_B, 2a66_A, 8hbm_B, 5krb_G, 5cbz_E, 4hn5_B, 4tnt_B, 5e69_A, 3g6t_A, 1r4i_A, 5emc_A, 7prw_B, 5cbx_B, 4rul_A
Binding Motifs: 6lc1_AD TGnCATnTGnnnGTnnATAnCA
6lc1_G gTAnaTAnnA
6lc1_GJ TGnCATnTgnnnGTAnATAnnA
Binding Sites: 6lc1_I
6lc1_L
Publications: Jiang L, Wei H, Yan N, Dai S, Li J, Qu L, Chen X, Guo M, Chen Z, Chen Y. Structural basis of NR4A1 bound to the human pituitary proopiomelanocortin gene promoter. Biochem Biophys Res Commun 523:1-5 (2020). [Pubmed]
Related annotations: PaperBLAST

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