Transcription Factor

						

			
Accessions: Q8LN68 (JASPAR 2024)

			
Names: OsTB1, OsTCP8, Protein FINE CULM 1, Protein TEOSINTE BRANCHED 1 homolog, TB1_ORYSJ, TCP transcription factor 8, Transcription factor TB1
Organisms: Oryza sativa
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q8LN68
Length: 388
Pfam Domains:   112-274 TCP family transcription factor
Sequence: 
(in bold interface residues)		   1 MLPFFDSPSPMDIPLYQQLQLTPPSPKPDHHHHHHSTFFYYHHHPPPSPSFPSFPSPAAA   60
  61 TIASPSPAMHPFMDLELEPHGQQLAAAEEDGAGGQGVDAGVPFGVDGAAAAAAARKDRHS  120
 121 KISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREIMSDDASS  180
 181 VCEEDGSSSLSVDGKQQQHSNPADRGGGAGDHKGAAHGHSDGKKPAKPRRAAANPKPPRR  240
 241 LANAHPVPDKESRAKARERARERTKEKNRMRWVTLASAISVEAATAAAAAGEDKSPTSPS  300
 301 NNLNHSSSTNLVSTELEDGSSSTRHNGVGVSGGRMQEISAASEASDVIMAFANGGAYGDS  360
 361 GSYYLQQQHQQDQWELGGVVYANSRHYC
Interface Residues: 117, 118, 119, 132, 134
3D-footprint Homologues: 7vp2_B, 7vp3_D
Binding Motifs: MA1430.1 GGsCCCCCcm
MA1430.2 GGsCCCCCc
			
Publications: Kosugi S., Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family.. Plant J. 30:337-348 (2002). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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