Transcription Factor
| Accessions: | T072086_1.02 (CISBP 1.02) |
| Names: | ATGRP2B, T072086_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:CSD |
| Length: | 201 |
| Pfam Domains: | 16-80 'Cold-shock' DNA-binding domain 137-152 Zinc knuckle 182-197 Zinc knuckle |
| Sequence: (in bold interface residues) | 1 MSGGGDVNMSGGDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEES 60 61 VEFDVEVDNSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGG 120 121 YGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGGGGGGGGGGL 180 181 SCYSCGESGHFARDCTSGGAR |
| Interface Residues: | 126, 147, 149, 150 |
| 3D-footprint Homologues: | 2pjr_A, 2jzw_A |
| Binding Motifs: | M0583_1.02 kTTTTwTT |
| Related annotations: | PaperBLAST |
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