Transcription Factor
| Accessions: | T060967_1.02 (CISBP 1.02) |
| Names: | NCU06186, T060967_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:C2H2 ZF |
| Length: | 793 |
| Sequence: (in bold interface residues) | 1 MASSSADPKAHNLAAGPYNCPDCTKVFARPCDLNKHSKSHTRPFKCLHSDCKYADLGWPT 60 61 LKELERHNNDKHAPNPIIYACEYEGCDYKSKRESNCKQHMEKAHGWLYTRSKSNGKQPAD 120 121 SSPVAPVYRLKPGPHPASASSTPLLKQSSDFLPVPNYHQDFTLYQDDTDHSVRFDDDDED 180 181 ASHHHDAPQVIPWTSPATRLRRNGTMIERFDQTYHGSQPLRISDNPVDPSLASIEPQIRT 240 241 SAAPPSTSEACGNGDTNISETSRQTRSSRGPSRKAADRQRIRKWDAKGSRKRLKPDATEI 300 301 LGDDAEFTDSNMPCIFRHAHPHLYNRETRNKSDPCHTTHRDISTLARHLRRPAHRLGVDP 360 361 RMISSFKIEDNNYPHPRVGLCRRCWQAFFDPLEFRSHLGLKCEKVSKGKREKWRIMHDLF 420 421 TPLVRQHGEQSSLLQNLDMAGQESTAHRTRGSINMPNKAGNDFRLVFGTVAPTKYGTSVP 480 481 SSSSLENEIQKLREENRQLRESLLAQGPKGGSVPSTVQSSAVHNAFEIASGSRLASAPRM 540 541 PHSKDSNSDQESLIGYMDSQSTDVDRDGLMSETPETFMRQNPGHSLPSHTTVHHVPTSPS 600 601 PLLINSFQDVSNFSQPSANVSLFSARKQPTSLADSAYGTCTDPRRGSLGEPGQAGCADIL 660 661 RGPHKSWFDNSTQQRHDGGSLALFGDYQFGHNNNSSANNESIHNNTPSSSTPKVGPNMTV 720 721 IATQTAQQQPQQQDFSGWSNPNPFATASTSQPSHNFFEDASFDFFMAAPTDCGDEPDGYN 780 781 PTSSSQNFIFPSM |
| Interface Residues: | 2, 3, 4, 7, 8, 28, 29, 30, 31, 32, 33, 34, 35, 36, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 70, 89, 90, 91, 92, 93, 94, 95, 97, 98, 102 |
| 3D-footprint Homologues: | 4m9v_C, 1tf3_A, 7y3l_A, 2kmk_A, 1g2f_F, 3uk3_C, 7w1m_H, 5kkq_D, 2jpa_A, 1f2i_J, 8ssq_A, 5kl3_A, 8ssu_A, 6u9q_A, 4x9j_A, 1ubd_C, 5v3j_F, 2wbs_A, 1llm_D, 5ei9_F, 2gli_A, 7ysf_A, 6blw_A, 6e94_A, 1tf6_A, 7y3m_I, 7txc_E |
| Binding Motifs: | M0480_1.02 wkaAGGCm |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.