Transcription Factor
Accessions: | T161730_1.02 (CISBP 1.02) |
Names: | T161730_1.02;, tah-1 |
Organisms: | Neurospora crassa |
Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
Notes: | experiment type:PBM, family:Zinc cluster |
Length: | 659 |
Pfam Domains: | 57-91 Fungal Zn(2)-Cys(6) binuclear cluster domain 210-380 Fungal specific transcription factor domain |
Sequence: (in bold interface residues) | 1 MEPFSPEAPHCNGTSSSSSPAVSSDSPGTATSGTVRNGSVATTTSQPSVPPPSVPAACLP 60 61 CRTKHLRCDGNHPCGRCTTTGIVADCAYIASRRGYKGPRRNPNNPTPGANPNKRHASSSP 120 121 PYAGTTPDSCPMMLGHAPVTMATPSVHAFNPSVVLPDQSQLSFPSTPSVASIPVYRNNYM 180 181 MDGTAMTLATQAAPPIQPPAASLPERCFEAFYHFFHAGHPFVLPKRNLVELLKSNSEPNL 240 241 PVLMAAMRYIGSLYVDAGPAKARFLDEAIQLCYAPGVRKDGFLIQALLLIIIGLDGSCEQ 300 301 ERARELLAICERYAIEIDLNKREFAVMHGRGDPIMEESWRRTWWDLYVCDGMIAGVHRVT 360 361 NFLLFDIMTDVGLPCEEEEYHKGCIPSPMSLEDFDDKEFQDEDREFSSFAYRVAAARNLG 420 421 RMMRMPNVMFPDAAEVDKMEAHLSNWRMHLPDNKRDDLDKNCQLDEMMFQAHFITHACTI 480 481 MLHQPLSQLDSSPVQAVNSCAPHRPVHSGDQYNAHTRHTVTAACEISKMITQAVPVTSHT 540 541 HFFTCVVTLSSIVHLSKWALYMIEDEADLRQQIRLNIGALNKLSKVWKAANTAWTQVKGV 600 601 AQEIYRQKKVQQITPAFWVGYTQEQMMTSIQADESIISEFDQGLIAQVGIAQVGVTQAQ |
Interface Residues: | 53, 64, 65, 66, 94, 100 |
3D-footprint Homologues: | 6o19_A, 1hwt_C, 1pyi_A, 1zme_D, 6gys_C |
Binding Motifs: | M1716_1.02 wrrwcsCCGr |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.