Transcription Factor
| Accessions: | F4JRB0 (JASPAR 2024) |
| Names: | HHO5_ARATH, MYB-domain transcription factor HHO5, Protein HRS1 HOMOLOG 5, Protein ULT1 INTERACTING FACTOR 1, Transcription factor HHO5 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | F4JRB0 |
| Length: | |
| Binding Motifs: | MA1164.1 harAAGATTCy MA1413.1 aaAGATTCyr MA1164.2 rAAGATTC |
| Binding Sites: | MA1164.2.7 MA1164.2.8 MA1164.2.10 MA1164.1.1 MA1164.1.10 MA1164.1.11 MA1164.1.12 MA1164.1.13 MA1164.1.14 MA1164.1.15 MA1164.1.16 MA1164.1.17 MA1164.1.18 MA1164.1.19 MA1164.1.2 MA1164.1.20 MA1164.1.3 MA1164.1.4 MA1164.1.5 MA1164.1.6 MA1164.1.7 MA1164.1.8 MA1164.1.9 MA1164.2.1 MA1164.2.11 MA1164.2.12 MA1164.2.13 MA1164.2.14 MA1164.2.15 MA1164.2.16 MA1164.2.17 MA1164.2.18 MA1164.2.19 MA1164.2.2 MA1164.2.20 MA1164.2.3 MA1164.2.4 MA1164.2.5 MA1164.2.6 MA1164.2.9 |
| Publications: | Hosoda K., Imamura A., Katoh E., Hatta T., Tachiki M., Yamada H., Mizuno T., Yamazaki T. Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators.. Plant Cell 14:2015-2029 (2002). [Pubmed] Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.