Transcription Factor

						

			
Accessions: G5EFY7 (JASPAR 2024)

			
Names: C2H2-type domain-containing protein, CePqM132, G5EFY7_CAEEL, Paraquat responsive protein, PQM1_CAEEL, Zinc finger transcription factor pqm-1
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: G5EFY7
Length: 295
Sequence: 
(in bold interface residues)		   1 MSFLNNDFGSPPATSSPPTTMPKLPTIQDMLNNIGASTVNLMQPNPYLMQNQIPLPVPNL   60
  61 PLNPFLHLNPAISQEIIQQFIAMSFNTPNVLASIANMGDDEGPSCNPKMRRGDLLKSVSM  120
 121 DSTEDPPSITLDNNGDMIVPNNDKEGWCRNKKYIEQTENGYMCTVCRKVYGRYNSVSYHV  180
 181 TIYHRNPPIKCNVPNCQFTTREARYIHFHKNYRHGIPLPESIDQGSRKCPHCRHVSKSPA  240
 241 MLEKHIRRHQIKDGLSNINEAIRERTSTICDEAMEIEPAETEVDPIETKPRSCTL
Interface Residues: 171, 172, 173, 174, 175, 177, 178, 198, 199, 200, 201, 202, 203, 204, 205, 206, 208, 209, 210, 212, 213, 238, 239, 240, 241, 242, 243, 244, 266, 268
3D-footprint Homologues: 1g2f_F, 8cuc_F, 7n5w_A, 2drp_D, 4x9j_A, 6wmi_A, 2jpa_A, 5kl3_A, 1llm_D, 2kmk_A, 6u9q_A, 8h9h_G, 7y3m_I, 7txc_E, 5yel_A, 3uk3_C, 8gn3_A, 1r71_B
Binding Motifs: MA1703.1 waCTGATAAsa
MA1703.2 aCTGATAA
			
Publications: Tepper RG, Ashraf J, Kaletsky R, Kleemann G, Murphy CT, Bussemaker HJ. PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity. Cell 154:676-690 (2013). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.