Transcription Factor

						

			
Accessions: T006785_1.02 (CISBP 1.02)

			
Names: e_gw1.5.76.1, T006785_1.02;
Organisms: Nectria haematococca
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:APSES
Length: 621
Pfam Domains:   132-206 KilA-N domain
Sequence: 
(in bold interface residues)		   1 MYYSQHMSGGQAPAPQTVTSGGMSHYTQQQPPLLPPGHAAAYSTPSYSHYPYAANGLTSP   60
  61 PPAQPTVSNPMAPQNVLPLPGAGNQNPMQNQYTGFDTTGQQPPPGMKPRVTATLWEDEGS  120
 121 LCFQVEARGICVARREDNHMINGTKLLNVAGMTRGRRDGILKSEKVRHVVKIGPMHLKGV  180
 181 WIPYDRALDFANKEKITELLYPLFVHNIGALLYHPANQSRTTQVMAAAERRKQEGMRNPG  240
 241 HPGLPSINHHQPMPLPGPQAQLPSHTMGRPSLDRAHTFPTPPTSASSVMGSMGASDSFNW  300
 301 QGQGMNGAQGTNPMTIETGLNNTRSMPNTPATTPPGNSLQSMQNYASSNQTYDGTRPMYN  360
 361 PQPHQSPYQSSAGNPQDRIYGQTSSYPKNDMAPPASRPSASEPSAEQQDTKPPNGMLQSD  420
 421 QPPQQHTNEDEGDHEHDAEYTHDSGAYDGSRNNYNYTAPSVGALTNDANLSTEMSGSPSL  480
 481 PPPSGRATPRTTAPAQSYYNQHTGYNTPPRVQQTSSSLYNVIGGNDRGAPNGAPGNDVYA  540
 541 PAADMSGLPNGYAQPPVMNGGAGVLKRGRDDDDDLSRSGNGPSMGSLDLKRRKTMMETTV  600
 601 PAPAYDAMTRPASAVGAPRRQ
Interface Residues: 154, 155, 171, 174, 178
3D-footprint Homologues: 4ux5_A
Binding Motifs: M0099_1.02 wymTGCAkrw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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