Transcription Factor
| Accessions: | K7W4V3 (JASPAR 2024) |
| Names: | K7W4V3_MAIZE |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | K7W4V3 |
| Length: | 476 |
| Pfam Domains: | 196-245 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MLAVSPSPVRCADAEECGGGGASKEMEETAVGPVSDSDLDFDFTVDDIDFGDFFLRLDDG 60 61 DDALPGLEVDPAEIVFADFEAIATAGGDGGVTDQEVPSVLPFADAAHIGAVDPCCGVLGE 120 121 DNDAACADVEEGKGECDHADEVAAAGNNNSDSGEAGCGGAFAGEKSPSSTASSSQEAESR 180 181 RKVSKKHSQGKKKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASH 240 241 LQKYRSHRKHMLAREVEAATWTTHRRPMYAAPSGAVKRPDSNAWTVPTIGFPPPAGTPPR 300 301 PVQHFGRPLHVWGHPSPTPAVESPRVPMWPRHLAPRAPPPPPWAPPPPADPASFWHHAYM 360 361 RQGPAAHMPDQVAVTPCVAVPMAAARFPAPHVRGSLPWPPPMYRPLVPPALAGKSQQDAL 420 421 FQLQIQPSSESIDAAIGDVLTKPWLPLPLGLKPPSVDSVMGELQRQGVANVPQACG |
| Interface Residues: | 195, 234, 235, 238, 239, 242, 243 |
| 3D-footprint Homologues: | 6j5b_C, 6qec_A, 7d3t_D |
| Binding Motifs: | MA1827.1 atCCTTATCyt MA1827.2 CCTTATC |
| Binding Sites: | MA1827.2.4 MA1827.1.13 / MA1827.1.14 MA1827.1.1 MA1827.1.10 / MA1827.1.11 MA1827.1.11 / MA1827.1.12 MA1827.1.12 / MA1827.1.13 MA1827.1.14 / MA1827.1.15 MA1827.1.15 / MA1827.1.16 MA1827.1.16 / MA1827.1.18 MA1827.1.17 / MA1827.1.19 MA1827.1.18 / MA1827.1.20 MA1827.1.19 MA1827.1.2 / MA1827.1.3 / MA1827.1.4 MA1827.1.20 MA1827.1.4 / MA1827.1.5 MA1827.1.5 / MA1827.1.6 MA1827.1.6 / MA1827.1.7 MA1827.1.7 / MA1827.1.8 MA1827.1.8 / MA1827.1.9 MA1827.1.10 / MA1827.1.9 MA1827.2.18 / MA1827.2.9 MA1827.2.17 MA1827.1.17 MA1827.1.3 MA1827.2.1 MA1827.2.10 MA1827.2.11 / MA1827.2.14 / MA1827.2.16 / MA1827.2.19 MA1827.2.12 / MA1827.2.15 / MA1827.2.2 / MA1827.2.3 MA1827.2.13 MA1827.2.20 MA1827.2.5 / MA1827.2.7 / MA1827.2.8 MA1827.2.6 |
| Publications: | Giuliano G., Pichersky E., Malik V. S., Timko M. P., Scolnik P. A., Cashmore A. R. An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene. Proc. Natl. Acad. Sci. USA 85:7089-7093 (1988). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.