Transcription Factor

Accessions: 2gat_A (3D-footprint 20231221), 3gat_A (3D-footprint 20231221)
Names: Eryf1, ERYTHROID TRANSCRIPTION FACTOR GATA-1, GATA-binding factor 1, GATA1_CHICK, NF-E1 DNA-binding protein, NF-E1a
Organisms: Gallus gallus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P17678
Length: 66
Pfam Domains: 7-40 GATA zinc finger
Sequence:
(in bold interface residues)
1 KRAGTVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKVSS 60
61 KGKKRR
Interface Residues: 16, 17, 19, 29, 33, 34, 37, 54, 56, 57
3D-footprint Homologues: 1gat_A, 3dfx_B, 3vd6_C, 4gat_A
Binding Motifs: 3gat_A AGaTa
2gat_A tatCT
Binding Sites: 2gat_B / 3gat_B
2gat_C / 3gat_C
Publications: Tjandra N, Omichinski J.G, Gronenborn A.M, Clore G.M, Bax A. Use of dipolar 1H-15N and 1H-13C couplings in the structure determination of magnetically oriented macromolecules in solution. Nature structural biology 4:732-8 (1997). [Pubmed]
Related annotations: PaperBLAST

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