Transcription Factor

						

			
Accessions: T109710_1.02 (CISBP 1.02)

			
Names: CG8765, T109710_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:MADF
Length: 600
Pfam Domains:   229-310 Alcohol dehydrogenase transcription factor Myb/SANT-like
  241-308 Myb/SANT-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MRDQYCRELKRAKACSKAVKWKYFKELDFLRPYALARNYRGRSGQTSNGAVGTVTPLSLP   60
  61 MTTSFSSNSSSQNLNLSGSIKIEDASASTLLDSCSFSSPSSTDKKPAATFLASHIGAVLQ  120
 121 QQQQQQQHQQQMHSQPEANWNYLTDAGGGATPSIIVQCGTANTTTVVDTLYNEIVDCVNA  180
 181 ANQSSSAATITSNVSTTSAAHNQSTNAEEEDDDPIHTFLNMESYFEKELITLIQQEDMIY  240
 241 NYGNENYRNAKLKMEVWEEIARKLKKSVKQCRLKWKALRDQYAREHKRLRTLMHIDATSR  300
 301 WKHYNSLSFLQKYIQQKTLESDSQLSMLLPKNDPVRELEDHMTQSHSPPTQQITLESSSS  360
 361 NSQLNLPTLPHLTGPHKAEQQQQQQQQEEQHQQQQQHQQQQQQQQASELCVATYDDMDIE  420
 421 NYINGDVHHNDDDVEDDEDEEMETTTAAEQPPQQQDQHVMTYDHEDGPVYMAVPSVGSAM  480
 481 SKQEQLSDGATSLENQQLQSTAEFQKIEIQTPTTPRYQNAATTPSSTSTSRYHSAPITPS  540
 541 KPTHMEYPSSNGHNSGEDDEIGAFFKAVSMKIRNAQLEPVAFTELQIDILRVINEALRNH  600
Interface Residues: 125, 157, 158, 160, 269, 272, 273
3D-footprint Homologues: 4r28_C, 6kks_A
Binding Motifs: M4885_1.02 TrwktmTGTmGCkT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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