Transcription Factor
| Accessions: | T089319_1.02 (CISBP 1.02) |
| Names: | FGSG_07909T0, T089319_1.02; |
| Organisms: | Gibberella zeae |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 752 |
| Pfam Domains: | 135-186 Homeobox domain 147-186 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MDSCPNCACCVVLDLFLFCPLEITAICKFHDMDMNTGDKTGAGNHTAISGPSINDLTDTA 60 61 PLDNADFGLILDQNTLDPNGFDMSFDELWSTDFNQAPDDANTTQNHLQQLNTFDSSSNQS 120 121 PILTPSTLPPKVGHRFTLEALRSLKEWFSTHINNPYPTEEEKTILEHQTGLSRTQITNWL 180 181 ANARRRRMITDGRGSGNTQVPEGYTPTRSGTPIPRRGQPLRDLNPLQRWENSPPENEPAT 240 241 ASDIARAMESGELIRSICLFCGQYNPDENHLVNHNPSACQERAFSRKDHLKQHLRLVHNA 300 301 ALTDLTTKLWKTAQPDITSRCGFCQASLSTWPDRVDHLANHFKLGCTMRSWIGDWGFNAS 360 361 VLKTLENAMPPYLVYFEGGTPFPFTANGSPPDCPRSAYELISIEMAYFIQNHNYKTGSLP 420 421 SHRALHLEACRIVFGSEIMFPETDPDSHGGSSWLRDLLLSSDEIVQQARFAPIRSRAESR 480 481 LSALRIKGKNALFEECLLESRLQAFVRTQREKGIYAISDEDLQREAGRVILQMESELQTK 540 541 PEYVANWLIGFLNHSTHWIGVFRQRVGLVSVNNSHNVIEPSNISQWQDSAQWQLGGSTWP 600 601 NGNDWLLVGHGDAAGTDTPWGTELENSTNHTSTDTSLQDFKWLWSDDQSPPAIPQSNPSP 660 661 EAESQPTLRPTWLGPGIYVLNDPNHIPWLAREMKRWVKAAMSPNNPISHIPSDEELRHQA 720 721 RCLLYNDDDPWNQTAADNAQWLEMFKKDVGIL |
| Interface Residues: | 94, 95, 102, 105, 106, 115, 132, 134, 135, 174, 175, 177, 178, 181, 182, 183, 185, 186, 249, 251, 252, 255, 261, 262, 266, 267, 269, 270, 286, 287, 288, 289, 292 |
| 3D-footprint Homologues: | 1e3o_C, 1o4x_A, 1mnm_C, 1k61_B, 1le8_B, 2ld5_A, 1puf_B, 1du0_A, 7psx_B, 4xrm_B, 6fqp_B, 2hdd_A, 6fqq_E, 3d1n_M, 2hos_A, 6m3d_C, 4x9j_A, 1f2i_J, 2drp_D, 5ei9_F, 6blw_A, 2wbs_A, 5kl3_A |
| Binding Motifs: | M0824_1.02 cwtgTmaw |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.