Transcription Factor

Accessions: 2hdc_A (3D-footprint 20241219)
Names: Forkhead box protein D3, FOXD3_RAT, Fragment, Hepatocyte nuclear factor 3 forkhead homolog 2, HFH-2, HNF3/FH transcription factor genesis, TRANSCRIPTION FACTOR
Organisms: Rattus norvegicus
Libraries: 3D-footprint 20241219 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q63245
Length: 97
Pfam Domains: 2-97 Fork head domain
Sequence:
(in bold interface residues)
1 VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCF 60
61 VKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKR
Interface Residues: 25, 44, 45, 47, 48, 49, 51, 52, 53, 55, 56, 65, 72, 93, 97
3D-footprint Homologues: 8vfz_O, 8bzm_E, 7vox_H, 2hdc_A, 7yzg_A, 7tdw_A, 7yz7_A, 3g73_A, 7tdx_A, 2a07_J, 7yzb_A, 6el8_A, 7vou_C, 2c6y_A, 7yze_A, 7cby_C, 8sro_B
Binding Motifs: 2hdc_A TGTTATttta
Binding Sites: 2hdc_B
2hdc_C
Publications: Jin C, Marsden I, Chen X, Liao X. Dynamic DNA contacts observed in the NMR structure of winged helix protein-DNA complex. Journal of molecular biology 289:683-90 (1999). [Pubmed]
Related annotations: PaperBLAST

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