Transcription Factor

						

			
Accessions: T128350_1.02 (CISBP 1.02)

			
Names: T128350_1.02;, XM_002866389.1
Organisms: Arabidopsis lyrata
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:NAC/NAM
Length: 336
Pfam Domains:    16-142 No apical meristem (NAM) protein
Sequence: 
(in bold interface residues)		   1 METFCGFQKEEEQMDLPPGFRFHPTDEELITHYLHKKVLDISFSAKAIGEVDLNKSEPWE   60
  61 LPWMAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLV  120
 121 FYRGRAPKGQKTNWVMHEYRLEGKLSAHNLPKTAKNEWVICRVFQKSAGGKKIPISSLIR  180
 181 IGSLGTDFNPSLLPSLTDSSPYNDKTKTEPVYVPCFSNQTDQNQGTTLNCFSSPVLNSIQ  240
 241 ADIFHRIPLYQTQSLQVSTNLQSPILTQEHSVLHAMIENNRRQSLKTMSVSQETGVSTDM  300
 301 NTDISSDFEFGKRRFDSQEDPSSSTGPVDLEPFWNY
Interface Residues: 82, 87, 89, 98, 100, 102, 122, 126, 127, 128, 131
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: M1410_1.02 ryACGcaAyc
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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