Transcription Factor
| Accessions: | T16585 (AthalianaCistrome v4_May2016) |
| Names: | ANAC050, AT3G10480, T16585; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:NAC |
| Length: | 526 |
| Pfam Domains: | 27-187 No apical meristem (NAM) protein |
| Sequence: (in bold interface residues) | 1 MGRESLAVVSSPPSATAPSTAVSATSLAPGFRFHPTDEELVSYYLKRKVLGKPVRFDAIG 60 61 EVDIYKHEPWDLAEKILCSYLALNCFKNFVFACATVMFACATVMFALFSKLKTRDQEWYF 120 121 FSALDKKYGNGARMNRATNKGYWKATGKDREIRRDIQLLGMKKTLVFHSGRAPDGLRTNW 180 181 VMHEYRLVEYETETNGSLLQDAYVLCRVFHKNNIGPPSGNRYAPFMEEEWADGGGALIPG 240 241 IDVRVRVEALPQANGNNQMDQWADLLKLHNSIKFAITFCRTQLNLTALSNERCSTREIFI 300 301 VFWLICKEMHSASKDLININELPRDATPMDIEPNQQNHHESAFKPQESNNHSGYEEDEDT 360 361 LKREHAEEDERPPSLCILNKEAPLPLLQYKRRRQNESNNNSSRNTQDHCSSTITTVDNTT 420 421 TLISSSAAAATNTAISALLEFSLMGISDKKENQQKEETSPPSPIASPEEKVNDLQKEVHQ 480 481 MSVERETFKLEMMSAEAMISILQSRIDALRQENEELKKKNASGQAS |
| Interface Residues: | 128, 133, 135, 144, 146, 148, 168, 172, 173, 174, 177 |
| 3D-footprint Homologues: | 7xp3_B, 3swp_A |
| Binding Motifs: | M0644 TaCTTGkrdarCAAG M0650 CTTGyrwhrCAMGtwA |
| Related annotations: | PaperBLAST |
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