Transcription Factor
| Accessions: | T100367_1.02 (CISBP 1.02) |
| Names: | Q6WL90, T100367_1.02; |
| Organisms: | Tripedalia cystophora |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 527 |
| Pfam Domains: | 11-135 'Paired box' domain 245-301 Homeobox domain 266-297 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MILQYEMNFESHGGVNQLGGVFVNGRPLPEQVRRRIVELAHQGVRPCDISRQLRVSHGCV 60 61 SKILGRYYETGSIKPGIIGGSKPKVATPGVVSKIAEYKRANPTMFAWEIRDRLLQDSVCS 120 121 QENVPSVSSINRIVRNRINSTGKEEEMKLEPGSVVLSPMTAGFPGVIQNGPLPRTPTSAY 180 181 SITGILGITAPQQGTPTMALTENDKRELPRDNGTVEVSMFQNSDSPMMEENNNIPNRGSV 240 241 GRGNRKNRYNFTPEQTDLLEQLFEKTPYPDATTREEIAKKTNLSEARVQVWFSNRRAKMR 300 301 KQDGGKDNQTQQHQQQHPGVIGNFPFQMQSPYMLHPIMGDEGHRYSPPDIKPQLTELRPV 360 361 AEGTIGLQNIFIPSTQPNGYDLGASHPSFLTPSPQHTPVFTMGASPGNPTTLAVSHPIDE 420 421 PAIKTETPPDTPAETTSISFTTPSVLIESQSASFTNMSTTLTLPPVSTLTKSTGESGGHY 480 481 GNANQYPQYSADQWLRYPSQGLMGRSVTQTPNWPTAATPISQTQQAS |
| Interface Residues: | 24, 56, 57, 59, 61, 62, 78, 81, 84, 126, 127, 128, 129, 131, 132, 135, 221, 222, 225, 244, 245, 246, 247, 248, 250, 286, 287, 289, 290, 293, 294, 296, 297, 298, 301 |
| 3D-footprint Homologues: | 1pdn_C, 1k78_A, 6pax_A, 5zfz_A, 1le8_B, 1k61_B, 8pmf_A, 6fqp_B, 8ejp_B, 1fjl_B, 1puf_A, 6a8r_A, 3cmy_A, 1ig7_A, 3d1n_M, 1zq3_P, 3lnq_A, 6m3d_C, 2lkx_A, 1nk2_P, 1jgg_B, 2ld5_A, 7q3o_C, 6es3_K, 4j19_B, 5flv_I, 8ik5_C, 7psx_B, 5zjt_E, 1au7_A, 3a01_E, 9b8u_A, 2h8r_B, 1mnm_C, 5hod_A, 3rkq_B, 8osb_E, 1b72_A, 2hdd_A, 8eml_B, 5jlw_D, 4cyc_A, 2r5y_A, 8pi8_B, 1puf_B, 4xrs_G, 2hos_A, 6wig_A, 2xsd_C, 1e3o_C, 7xrc_C, 1le8_A, 8bx1_A, 4qtr_D, 4xrm_B, 1du0_A, 8g87_X, 1o4x_A |
| Binding Motifs: | M1173_1.02 wtAATyrr |
| Related annotations: | PaperBLAST |
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