Transcription Factor
| Accessions: | 1tf6_A (3D-footprint 20231221) |
| Names: | S-TFIIIA/O-TFIIIA, TF3A_XENLA, TFIIIA, TRANSCRIPTION FACTOR IIIA |
| Organisms: | Xenopus laevis |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P03001 |
| Length: | 179 |
| Pfam Domains: | 4-28 C2H2-type zinc finger 21-47 Zinc-finger double domain 34-58 C2H2-type zinc finger 50-77 Zinc-finger double domain 64-89 Zinc finger, C2H2 type 64-89 C2H2-type zinc finger 96-120 Zinc finger, C2H2 type 96-120 C2H2-type zinc finger 113-138 Zinc-finger double domain 126-150 Zinc finger, C2H2 type 126-150 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 60 61 EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 120 121 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH |
| Interface Residues: | 15, 16, 17, 18, 19, 20, 22, 23, 29, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 59, 76, 77, 78, 79, 80, 83, 87, 99, 100, 101, 108, 109, 110, 111, 112, 113, 114, 115, 116, 138, 139, 140, 141, 142, 143, 144, 145, 146, 173 |
| 3D-footprint Homologues: | 8gn3_A, 3uk3_C, 1tf3_A, 5v3j_F, 2gli_A, 1g2f_F, 5kkq_D, 1tf6_A, 4x9j_A, 5kl3_A, 1ubd_C, 7ysf_A, 6wmi_A, 5ei9_F, 5und_A, 1f2i_J, 5k5i_A, 8ssu_A, 2lt7_A, 2i13_A, 7w1m_H, 7n5w_A, 8cuc_F, 7y3l_A, 6ml4_A, 6blw_A, 1llm_D, 7txc_E, 2wbs_A, 5yj3_D, 8ssq_A, 1mey_C, 2drp_D, 8h9h_G, 7eyi_G, 7y3m_I, 6e94_A, 2jpa_A, 5yel_A, 6jnm_A, 6u9q_A, 2kmk_A, 4m9v_C, 6a57_A |
| Binding Motifs: | 1tf6_A TGGTnannnnnnkGATGGGAAACC |
| Binding Sites: | 1tf6_B 1tf6_C |
| Publications: | Nolte R.T, Conlin R.M, Harrison S.C, Brown R.S. Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex. Proceedings of the National Academy of Sciences of the United States of America 95:2938-43 (1998). [Pubmed] |
| Related annotations: | PaperBLAST |
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