Transcription Factor
| Accessions: | Q03923 (JASPAR 2024) |
| Names: | Zinc finger protein 85, Zinc finger protein HPF4, Zinc finger protein HTF1, ZNF85_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q03923 |
| Length: | 595 |
| Pfam Domains: | 4-44 KRAB box 161-183 Zinc-finger double domain 174-194 C2H2-type zinc finger 189-212 Zinc-finger double domain 202-224 C2H2-type zinc finger 202-224 Zinc finger, C2H2 type 202-222 C2H2-type zinc finger 217-240 Zinc-finger double domain 229-250 C2H2-type zinc finger 230-252 C2H2-type zinc finger 230-252 Zinc finger, C2H2 type 244-268 Zinc-finger double domain 257-277 C2H2-type zinc finger 258-280 C2H2-type zinc finger 258-280 Zinc finger, C2H2 type 273-296 Zinc-finger double domain 285-306 C2H2-type zinc finger 286-308 Zinc finger, C2H2 type 286-308 C2H2-type zinc finger 301-325 Zinc-finger double domain 313-333 C2H2-type zinc finger 314-336 Zinc finger, C2H2 type 314-336 C2H2-type zinc finger 328-352 Zinc-finger double domain 341-352 C2H2-type zinc finger 342-361 C2H2-type zinc finger 342-364 Zinc finger, C2H2 type 356-381 Zinc-finger double domain 369-389 C2H2-type zinc finger 370-392 C2H2-type zinc finger 370-392 Zinc finger, C2H2 type 384-409 Zinc-finger double domain 397-417 C2H2-type zinc finger 398-420 C2H2-type zinc finger 398-420 Zinc finger, C2H2 type 413-436 Zinc-finger double domain 425-446 C2H2-type zinc finger 426-448 Zinc finger, C2H2 type 441-464 Zinc-finger double domain 453-476 C2H2-type zinc finger 454-476 C2H2-type zinc finger 454-476 Zinc finger, C2H2 type 468-492 Zinc-finger double domain 482-504 Zinc finger, C2H2 type 497-520 Zinc-finger double domain 509-530 C2H2-type zinc finger 510-532 Zinc finger, C2H2 type 510-532 C2H2-type zinc finger 525-548 Zinc-finger double domain 537-558 C2H2-type zinc finger 538-560 Zinc finger, C2H2 type 538-560 C2H2-type zinc finger 552-576 Zinc-finger double domain 565-585 C2H2-type zinc finger 566-588 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MGPLTFRDVAIEFSLKEWQCLDTAQRNLYRNVMLENYRNLVFLGITVSKPDLITCLEQGK 60 61 EAWSMKRHEIMVAKPTVMCSHFAQDLWPEQNIKDSFQKVTLKRYGKCRHENLPLRKGCES 120 121 MDECKMHKGGCNGLNQCLTATQSKIFQCDKYVKVAHKFSNSNRHEIRHTKKKPFKCTKCG 180 181 KSFGMISCLTEHSRIHTRVNFYKCEECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFN 240 241 QSSNLIKHKKIHTGEKPYKCEECGKTFNRFSTLTTHKIIHTGEKPYKCKECGKAFNRSST 300 301 LTTHRKIHTGEKPYKCEECGKAFKQSSNLTTHKIIHTGEKPYKCKKCGKAFNQSAHLTTH 360 361 EVIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHTGEKPYKCKECGKAFKHSSTLTKHKIIH 420 421 TGEKPYKCKECEKAFNQSSKLTEHKKIHTGEKPYECEKCGKAFNQSSNLTRHKKSHTEEK 480 481 PYKCEECGKGFKWPSTLTIHKIIHTGEKPYKCEECGKAFNQSSKLTKHKKIHTGEKPYTC 540 541 EECGKAFNQSSNLTKHKRIHTGEKPYKCEECDKAFKWSSVLTKHKIIHTGEKLQI |
| Interface Residues: | 213, 215, 216, 219, 241, 242, 243, 244, 247, 269, 270, 271, 272, 274, 275, 277, 278, 281, 286, 296, 297, 298, 299, 300, 303, 324, 325, 326, 327, 328, 330, 331, 335, 352, 353, 354, 355, 356, 358, 359, 381, 382, 383, 384, 387, 391, 408, 409, 410, 411, 412, 414, 415, 436, 437, 438, 439, 440, 443, 445, 446, 447, 465, 466, 467, 468, 470, 471, 477, 491, 492, 493, 494, 495, 496, 499, 503, 520, 521, 522, 523, 524, 525, 526, 527, 528, 548, 549, 550, 551, 552, 553, 555, 556, 576, 577, 578, 579, 580, 582, 583 |
| 3D-footprint Homologues: | 6u9q_A, 8gn3_A, 5kl3_A, 4x9j_A, 7w1m_H, 2jpa_A, 2kmk_A, 3uk3_C, 8cuc_F, 7y3l_A, 1llm_D, 7y3m_I, 1g2f_F, 2wbs_A, 5v3j_F, 5yj3_D, 8ssq_A, 8ssu_A, 1tf6_A, 7ysf_A, 6jnm_A, 2drp_D, 6blw_A, 2lt7_A, 6a57_A, 5yel_A, 5k5i_A, 5k5l_F, 5kkq_D, 6ml4_A, 5ei9_F, 7n5w_A, 2gli_A, 8h9h_G, 6e94_A, 1ubd_C, 1tf3_A, 7txc_E, 1f2i_J, 4m9v_C |
| Binding Motifs: | MA1720.1 / UN0240.1 amrrAGATTaCwkCAk MA1720.2 rAGATTaCwkCA |
| Binding Sites: | UN0240.1.1 MA1720.1.5 / UN0240.1.10 MA1720.1.6 / UN0240.1.11 MA1720.1.7 / UN0240.1.12 UN0240.1.13 MA1720.1.8 / UN0240.1.14 MA1720.1.9 / UN0240.1.15 MA1720.1.10 / UN0240.1.16 UN0240.1.17 UN0240.1.18 UN0240.1.19 UN0240.1.2 UN0240.1.20 MA1720.1.1 / UN0240.1.3 MA1720.1.2 / UN0240.1.4 UN0240.1.5 MA1720.1.3 / UN0240.1.6 UN0240.1.7 MA1720.1.4 / UN0240.1.8 UN0240.1.9 MA1720.1.11 MA1720.1.12 MA1720.1.13 MA1720.1.14 MA1720.1.15 MA1720.1.16 MA1720.1.17 MA1720.1.18 MA1720.1.19 MA1720.1.20 MA1720.2.1 MA1720.2.10 / MA1720.2.12 / MA1720.2.14 / MA1720.2.16 / MA1720.2.17 / MA1720.2.19 / MA1720.2.2 / MA1720.2.3 / MA1720.2.4 / MA1720.2.5 / MA1720.2.6 / MA1720.2.7 / MA1720.2.8 / MA1720.2.9 MA1720.2.11 MA1720.2.13 MA1720.2.15 MA1720.2.18 MA1720.2.20 |
| Publications: | Imbeault M, Helleboid PY, Trono D. KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks. Nature 543:550-554 (2017). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.