Transcription Factor
| Accessions: | T104528_1.02 (CISBP 1.02) |
| Names: | pax2, T104528_1.02; |
| Organisms: | Xenopus (Silurana) tropicalis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain,Paired box |
| Length: | 140 |
| Pfam Domains: | 16-136 'Paired box' domain |
| Sequence: (in bold interface residues) | 1 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 60 61 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120 121 EGICDNDTVPSVSSINSKQT |
| Interface Residues: | 29, 61, 62, 64, 66, 67, 83, 86, 89, 131, 132, 133, 134, 136 |
| 3D-footprint Homologues: | 1k78_A, 1pdn_C, 6pax_A |
| Binding Motifs: | M1224_1.02 mrtGvyymvs |
| Related annotations: | PaperBLAST |
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