Transcription Factor
| Accessions: | CRL1 (EEADannot 2025-01-07) |
| Names: | LOC_Os03g05510, Os03g0149100 |
| Organisms: | Oryza sativa |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Other C4 zinc finger-type factors LBD |
| Length: | 259 |
| Pfam Domains: | 7-106 Protein of unknown function DUF260 |
| Sequence: (in bold interface residues) | 1 MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLAD 60 61 RPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGIHHQDVGAT 120 121 TKGGYMSAAATAADDQLGYGGYNQWCGSNGGGAPAASQPGAYSSNGGAGHGHDSITALLA 180 181 AGSDYMQHSLYHAFEHSEGAGAVDDGHAAAAAFEAAAESSSCGMAASFAADESVWRSSSS 240 241 GYQDCEDLQSVAYAYLNRS |
| Interface Residues: | 50 |
| 3D-footprint Homologues: | 1zlk_A |
| Binding Motifs: | EEAD0081 CACAmm |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.